Otago Bioinformatics Spring School 2025

RNA-seq Data Analysis

Workshop schedule

Thursday 20th November, 2025

Approx time	Item
09:30 - 10:00	RNA-seq presentation by Dr Katerina Achilleos.
10:00 - 10:30	An overview of RNA-seq data analysis workflows
. . .	Sequence Quality
10:30 - 10:50	BREAK
10:50 - 12:15	Sequence Quality
. . .	Quantifying Gene Expression
12:15 - 13:00	LUNCH
13:00 - 14:30	Exploratory analysis
14:40 - 15:00	BREAK
15:00 - 16:30	Identifying differentially expressed genes
. . .	Functional analysis
16:30	END OF DAY

Setup

During the workshop, code will be run in real-time to demonstrate the analysis. This will be run on the REANNZ Open OnDemand platform which already has all the required software and R packages installed.

Attribution notice

This workshop is an adapted version of the Genomics Aotearoa RNA-seq Data Analysis workshop, modified to be taught in one day.

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