Monday 18th Nov

Time	What
09:30	Welcome
10:00	Introduction to NeSI
10:45	Break
11:05	Introduction to BASH
12:15	Lunch
13:00	Keynote: Associate Professor Phillip Wilcox - Māori Genomic Data
14:15	Break
14:35	Intro to R
16:30	End of Day

Introduction to NeSI

Learning objectives:

• Log onto NeSI
• Log off from NeSI

Introduction to NeSI lesson material

Introduction to Unix commandline (BASH)

Learning objectives:

• Use the shell to navigate directories
• Perform operations on files in directories outside your working directory
• Interconvert between relative and absolute paths
• View, search within, copy, move, and rename files. Create new directories.
• Construct command pipelines with two or more stages.
• Use for loops to run the same command for several input files.

Introduction to Unix commandline lesson material

Extension: Shell for Bioinformatics

Introduction to R

Learning objectives:

• Assign values to variables
• Select individual values and subsections from data
• Perform operations on a data frame of data
• Display simple graphs

Introduction to R